STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BA190_34560Peptidase M20; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)    
Predicted Functional Partners:
OCC05608.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OCC00699.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OCC05870.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
OCC02767.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
OCC03791.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
OCC01328.1
Isochorismatase; 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.729
OCC04289.1
trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.681
OCC03855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.670
OCC05995.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.591
OCC03121.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.591
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.