STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCC00310.1aminoacyl-tRNA deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)    
Predicted Functional Partners:
OCC06716.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.609
OCC02698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.609
OCC01463.1
proline--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.574
OCC00308.1
Ala-tRNA(Pro) hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
OCC03330.1
aspartate--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.447
OCC00309.1
Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.426
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.