STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BA190_34985Hydroxypyruvate isomerase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (296 aa)    
Predicted Functional Partners:
OCC00347.1
Glyoxylate carboligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.846
OCC06965.1
6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.720
OCC07083.1
Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.719
OCC02869.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.719
OCC00396.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.672
OCC02867.1
Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.659
OCC06183.1
Glyoxylate carboligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.632
OCC04496.1
Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.614
OCC04081.1
D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.613
OCC02234.1
D-glycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.613
Your Current Organism:
Labrys sp. WJW
NCBI taxonomy Id: 1737983
Other names: L. sp. WJW
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.