AMW30025.1 protein (Arthrospira platensis YZ)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AMW30025.1

DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)

Predicted Functional Partners:

AMW27746.1

0.756

AMW29468.1

0.750

AP285_10275

0.747

AMW30539.1

0.736

AMW27149.1

0.735

AMW28693.1

0.735

AMW29490.1

0.735

AMW30278.1

0.735

AMW28352.1

0.733

AMW27931.1

0.732

Your Current Organism:

Arthrospira platensis YZ

NCBI taxonomy Id: 1738638
Other names: A. platensis YZ

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMW27149.1	AMW30025.1	AP285_03270	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW27746.1	AMW30025.1	AP285_06910	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
AMW27931.1	AMW30025.1	AP285_07990	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
AMW28352.1	AMW30025.1	AP285_10555	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AMW28693.1	AMW30025.1	AP285_12685	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW29468.1	AMW30025.1	AP285_17535	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
AMW29490.1	AMW30025.1	AP285_17690	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW30025.1	AMW27149.1	AP285_20905	AP285_03270	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW30025.1	AMW27746.1	AP285_20905	AP285_06910	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.756
AMW30025.1	AMW27931.1	AP285_20905	AP285_07990	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.732
AMW30025.1	AMW28352.1	AP285_20905	AP285_10555	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AMW30025.1	AMW28693.1	AP285_20905	AP285_12685	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW30025.1	AMW29468.1	AP285_20905	AP285_17535	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
AMW30025.1	AMW29490.1	AP285_20905	AP285_17690	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW30025.1	AMW30278.1	AP285_20905	AP285_22465	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW30025.1	AMW30539.1	AP285_20905	AP285_23935	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
AMW30025.1	AP285_10275	AP285_20905	AP285_10275	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747
AMW30278.1	AMW30025.1	AP285_22465	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AMW30539.1	AMW30025.1	AP285_23935	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.736
AP285_10275	AMW30025.1	AP285_10275	AP285_20905	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747