STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_00153Unannotated protein. (496 aa)    
Predicted Functional Partners:
GCA_001509585_02005
Unannotated protein.
 
 0.970
GCA_001509585_03787
Unannotated protein.
 
 0.964
GCA_001509585_01994
Unannotated protein.
   
 
 0.957
GCA_001509585_02079
Unannotated protein.
 0.944
GCA_001509585_03049
Unannotated protein.
   
 0.915
GCA_001509585_01996
Unannotated protein.
 
 0.912
GCA_001509585_04519
Unannotated protein.
 
 0.899
GCA_001509585_00803
Unannotated protein.
  
 
 0.864
GCA_001509585_00828
Unannotated protein.
   
  0.814
GCA_001509585_00253
Unannotated protein.
    
 0.812
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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