STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_00323Unannotated protein. (333 aa)    
Predicted Functional Partners:
GCA_001509585_00324
Unannotated protein.
  0.981
GCA_001509585_00325
Unannotated protein.
 
  0.980
GCA_001509585_00889
Unannotated protein.
 
   
  0.977
GCA_001509585_00322
Unannotated protein.
 
 
  0.955
GCA_001509585_03102
Unannotated protein.
 
 
 
  0.905
GCA_001509585_02795
Unannotated protein.
 
  0.892
GCA_001509585_03722
Unannotated protein.
 
  0.891
GCA_001509585_02796
Unannotated protein.
 
 
  0.887
GCA_001509585_04080
Unannotated protein.
 
   
 
0.873
GCA_001509585_03723
Unannotated protein.
 
  0.870
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
Server load: low (22%) [HD]