STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_00627Unannotated protein. (91 aa)    
Predicted Functional Partners:
GCA_001509585_04136
Unannotated protein.
  
    0.781
GCA_001509585_02558
Unannotated protein.
  
    0.609
GCA_001509585_00519
Unannotated protein.
  
    0.578
GCA_001509585_04726
Unannotated protein.
   
    0.532
GCA_001509585_00626
Unannotated protein.
       0.509
GCA_001509585_05056
Unannotated protein.
  
     0.445
GCA_001509585_00683
Unannotated protein.
  
     0.420
GCA_001509585_00133
Unannotated protein.
  
     0.413
GCA_001509585_01846
Unannotated protein.
  
    0.411
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
Server load: low (24%) [HD]