STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_00650Unannotated protein. (511 aa)    
Predicted Functional Partners:
GCA_001509585_00649
Unannotated protein.
   
 0.917
GCA_001509585_00647
Unannotated protein.
 
   
 0.784
GCA_001509585_00648
Unannotated protein.
     
 0.756
GCA_001509585_00780
Unannotated protein.
 
   
 0.752
GCA_001509585_00651
Unannotated protein.
      0.717
GCA_001509585_02267
Unannotated protein.
  
   
 0.693
GCA_001509585_02246
Unannotated protein.
 
   
 0.678
GCA_001509585_00652
Unannotated protein.
 
   
 0.621
GCA_001509585_03223
Unannotated protein.
  
   
 0.596
GCA_001509585_03227
Unannotated protein.
  
   
 0.595
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.