STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_01036Unannotated protein. (324 aa)    
Predicted Functional Partners:
GCA_001509585_01035
Unannotated protein.
  
 0.981
GCA_001509585_01034
Unannotated protein.
 
  
 0.962
GCA_001509585_01887
Unannotated protein.
  
 0.915
GCA_001509585_01886
Unannotated protein.
 
  
 0.831
GCA_001509585_01037
Unannotated protein.
       0.789
GCA_001509585_01038
Unannotated protein.
       0.789
GCA_001509585_01039
Unannotated protein.
       0.789
GCA_001509585_01041
Unannotated protein.
 
     0.785
GCA_001509585_01040
Unannotated protein.
       0.716
GCA_001509585_01308
Unannotated protein.
 
  
  0.666
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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