STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_01196Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_001509585_04758
Unannotated protein.
0.985
GCA_001509585_04915
Unannotated protein.
0.984
GCA_001509585_01195
Unannotated protein.
  0.979
GCA_001509585_02238
Unannotated protein.
 0.927
GCA_001509585_03396
Unannotated protein.
  0.913
GCA_001509585_03887
Unannotated protein.
 0.906
GCA_001509585_01235
Unannotated protein.
 0.896
GCA_001509585_04781
Unannotated protein.
 0.885
GCA_001509585_01670
Unannotated protein.
  0.846
GCA_001509585_02125
Unannotated protein.
  0.842
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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