STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_02577Unannotated protein. (406 aa)    
Predicted Functional Partners:
GCA_001509585_02576
Unannotated protein.
 
  0.993
GCA_001509585_02575
Unannotated protein.
 
  0.945
GCA_001509585_02579
Unannotated protein.
 
     0.915
GCA_001509585_02578
Unannotated protein.
 
     0.910
GCA_001509585_02573
Unannotated protein.
 
     0.885
GCA_001509585_02574
Unannotated protein.
 
    0.885
GCA_001509585_02580
Unannotated protein.
 
  0.777
GCA_001509585_04994
Unannotated protein.
  
  0.694
GCA_001509585_01798
Unannotated protein.
  
  0.675
GCA_001509585_01797
Unannotated protein.
  
  0.668
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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