STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_03254Unannotated protein. (286 aa)    
Predicted Functional Partners:
GCA_001509585_03252
Unannotated protein.
 
     0.912
GCA_001509585_04205
Unannotated protein.
      0.893
GCA_001509585_03251
Unannotated protein.
 
 
  0.878
GCA_001509585_03253
Unannotated protein.
 
     0.861
GCA_001509585_03255
Unannotated protein.
    
 0.815
GCA_001509585_04200
Unannotated protein.
 
  
  0.741
GCA_001509585_04185
Unannotated protein.
 
  
  0.695
GCA_001509585_01014
Unannotated protein.
    
  0.673
GCA_001509585_00035
Unannotated protein.
    
  0.650
GCA_001509585_04838
Unannotated protein.
    
  0.646
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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