STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_03364Unannotated protein. (307 aa)    
Predicted Functional Partners:
GCA_001509585_04739
Unannotated protein.
  
     0.626
GCA_001509585_04834
Unannotated protein.
  
     0.593
GCA_001509585_03015
Unannotated protein.
  
     0.556
GCA_001509585_01762
Unannotated protein.
  
     0.529
GCA_001509585_03365
Unannotated protein.
       0.500
GCA_001509585_01885
Unannotated protein.
  
     0.471
GCA_001509585_03537
Unannotated protein.
  
     0.414
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.