STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_03505Unannotated protein. (485 aa)    
Predicted Functional Partners:
GCA_001509585_00656
Unannotated protein.
  
 0.984
GCA_001509585_03429
Unannotated protein.
  
  
 0.950
GCA_001509585_03182
Unannotated protein.
 
  
 0.872
GCA_001509585_00936
Unannotated protein.
 
  
 0.846
GCA_001509585_04638
Unannotated protein.
 
  
 0.806
GCA_001509585_03018
Unannotated protein.
 
  
 0.802
GCA_001509585_04864
Unannotated protein.
 
   
 0.762
GCA_001509585_00825
Unannotated protein.
  
  
 0.728
GCA_001509585_01635
Unannotated protein.
  
  
 0.692
GCA_001509585_03566
Unannotated protein.
  
  
 0.691
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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