STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_03756Unannotated protein. (149 aa)    
Predicted Functional Partners:
GCA_001509585_03762
Unannotated protein.
  
    0.704
GCA_001509585_03763
Unannotated protein.
  
    0.690
GCA_001509585_03754
Unannotated protein.
  
    0.551
GCA_001509585_03744
Unannotated protein.
   
    0.519
GCA_001509585_03745
Unannotated protein.
   
    0.513
GCA_001509585_03757
Unannotated protein.
       0.493
GCA_001509585_03758
Unannotated protein.
       0.487
GCA_001509585_03759
Unannotated protein.
  
    0.478
GCA_001509585_03761
Unannotated protein.
  
    0.463
GCA_001509585_03760
Unannotated protein.
       0.431
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.