STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_04214Unannotated protein. (99 aa)    
Predicted Functional Partners:
GCA_001509585_04213
Unannotated protein.
  
  
 0.976
GCA_001509585_04212
Unannotated protein.
  
  
 0.914
GCA_001509585_01381
Unannotated protein.
  
  
 0.887
GCA_001509585_01632
Unannotated protein.
   
 
  0.881
GCA_001509585_01213
Unannotated protein.
  
  
 0.853
GCA_001509585_03508
Unannotated protein.
  
    0.806
GCA_001509585_04692
Unannotated protein.
 
    0.779
GCA_001509585_04827
Unannotated protein.
  
    0.761
GCA_001509585_01430
Unannotated protein.
   
    0.688
GCA_001509585_01434
Unannotated protein.
   
    0.682
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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