STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_04323Unannotated protein. (1188 aa)    
Predicted Functional Partners:
GCA_001509585_02873
Unannotated protein.
  
 
  0.813
GCA_001509585_02240
Unannotated protein.
  
    0.716
GCA_001509585_02867
Unannotated protein.
  
 
0.714
GCA_001509585_03521
Unannotated protein.
  
 
0.713
GCA_001509585_03959
Unannotated protein.
  
 
0.668
GCA_001509585_02241
Unannotated protein.
  
   0.665
GCA_001509585_04819
Unannotated protein.
  
   0.645
GCA_001509585_04820
Unannotated protein.
  
    0.643
GCA_001509585_00305
Unannotated protein.
  
     0.612
GCA_001509585_05076
Unannotated protein.
 
 
  0.601
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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