STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_04750Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_001509585_04118
Unannotated protein.
    
 0.826
GCA_001509585_04196
Unannotated protein.
  
 
  0.822
GCA_001509585_03477
Unannotated protein.
    
 0.787
GCA_001509585_03574
Unannotated protein.
   
 0.750
GCA_001509585_04158
Unannotated protein.
   
 0.750
GCA_001509585_03049
Unannotated protein.
    
 0.740
GCA_001509585_00429
Unannotated protein.
   
  0.734
GCA_001509585_00430
Unannotated protein.
   
  0.732
GCA_001509585_02349
Unannotated protein.
    
 0.721
GCA_001509585_04296
Unannotated protein.
    
 0.721
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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