STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001509585_04909Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_001509585_04908
Unannotated protein.
 
 
  0.926
GCA_001509585_04906
Unannotated protein.
 
    0.874
GCA_001509585_04907
Unannotated protein.
 
 
  0.855
GCA_001509585_04905
Unannotated protein.
 
    0.828
GCA_001509585_04910
Unannotated protein.
  
 
  0.802
GCA_001509585_04911
Unannotated protein.
  
 
  0.780
GCA_001509585_04913
Unannotated protein.
  
    0.778
GCA_001509585_01810
Unannotated protein.
   
 0.775
GCA_001509585_03951
Unannotated protein.
   
 0.744
GCA_001509585_04624
Unannotated protein.
 
  
 0.658
Your Current Organism:
Pseudoruegeria marinistellae
NCBI taxonomy Id: 1739787
Other names: KCTC 42910, MCCC 1K01155, P. marinistellae, Pseudoruegeria marinistellae Zhang et al. 2017, Pseudoruegeria sp. SF-16, strain SF-16
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