STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH55221.1Flagellar motor switch protein FliG. (339 aa)    
Predicted Functional Partners:
SEH55209.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 0.999
SEH99545.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 0.999
SEH99538.1
Flagellar motor switch protein FliN/FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 0.998
SEH99600.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 0.997
SEH55251.1
Flagellum-specific ATP synthase.
 
 0.995
SEH55069.1
Type III flagellar switch regulator (C-ring) FliN C-term.
  
 0.990
SEH55084.1
Flagellar motor switch protein FliN/FliY.
 
 0.990
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.988
SEH54691.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.986
SEH99872.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
 
 0.986
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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