Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH59860.1 | SEH63531.1 | SAMN05660691_00422 | SAMN05660691_00528 | Glycerophosphoryl diester phosphodiesterase. | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | 0.632 |
SEH59860.1 | SEH65178.1 | SAMN05660691_00422 | SAMN05660691_00647 | Glycerophosphoryl diester phosphodiesterase. | Glycerol-3-phosphate dehydrogenase. | 0.861 |
SEH59860.1 | SEH84419.1 | SAMN05660691_00422 | SAMN05660691_01737 | Glycerophosphoryl diester phosphodiesterase. | Lysophospholipase. | 0.598 |
SEH59860.1 | SEH96868.1 | SAMN05660691_00422 | SAMN05660691_02475 | Glycerophosphoryl diester phosphodiesterase. | FAD/FMN-containing dehydrogenase. | 0.707 |
SEH59860.1 | SEH97440.1 | SAMN05660691_00422 | SAMN05660691_02528 | Glycerophosphoryl diester phosphodiesterase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.622 |
SEH59860.1 | SEI01787.1 | SAMN05660691_00422 | SAMN05660691_02846 | Glycerophosphoryl diester phosphodiesterase. | D-lactate dehydrogenase. | 0.707 |
SEH59860.1 | SEI10459.1 | SAMN05660691_00422 | SAMN05660691_03701 | Glycerophosphoryl diester phosphodiesterase. | Glycerophosphoryl diester phosphodiesterase. | 0.632 |
SEH59860.1 | aqpZ | SAMN05660691_00422 | SAMN05660691_02995 | Glycerophosphoryl diester phosphodiesterase. | Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.752 |
SEH59860.1 | miaA | SAMN05660691_00422 | SAMN05660691_00431 | Glycerophosphoryl diester phosphodiesterase. | tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.616 |
SEH59860.1 | rsgA | SAMN05660691_00422 | SAMN05660691_00424 | Glycerophosphoryl diester phosphodiesterase. | Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.692 |
SEH63531.1 | SEH59860.1 | SAMN05660691_00528 | SAMN05660691_00422 | Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. | Glycerophosphoryl diester phosphodiesterase. | 0.632 |
SEH65178.1 | SEH59860.1 | SAMN05660691_00647 | SAMN05660691_00422 | Glycerol-3-phosphate dehydrogenase. | Glycerophosphoryl diester phosphodiesterase. | 0.861 |
SEH65178.1 | SEH96868.1 | SAMN05660691_00647 | SAMN05660691_02475 | Glycerol-3-phosphate dehydrogenase. | FAD/FMN-containing dehydrogenase. | 0.942 |
SEH65178.1 | SEI01787.1 | SAMN05660691_00647 | SAMN05660691_02846 | Glycerol-3-phosphate dehydrogenase. | D-lactate dehydrogenase. | 0.926 |
SEH65178.1 | SEI10459.1 | SAMN05660691_00647 | SAMN05660691_03701 | Glycerol-3-phosphate dehydrogenase. | Glycerophosphoryl diester phosphodiesterase. | 0.879 |
SEH65178.1 | aqpZ | SAMN05660691_00647 | SAMN05660691_02995 | Glycerol-3-phosphate dehydrogenase. | Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.930 |
SEH84419.1 | SEH59860.1 | SAMN05660691_01737 | SAMN05660691_00422 | Lysophospholipase. | Glycerophosphoryl diester phosphodiesterase. | 0.598 |
SEH84419.1 | SEI10459.1 | SAMN05660691_01737 | SAMN05660691_03701 | Lysophospholipase. | Glycerophosphoryl diester phosphodiesterase. | 0.598 |
SEH96868.1 | SEH59860.1 | SAMN05660691_02475 | SAMN05660691_00422 | FAD/FMN-containing dehydrogenase. | Glycerophosphoryl diester phosphodiesterase. | 0.707 |
SEH96868.1 | SEH65178.1 | SAMN05660691_02475 | SAMN05660691_00647 | FAD/FMN-containing dehydrogenase. | Glycerol-3-phosphate dehydrogenase. | 0.942 |
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