Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH67151.1 | SEH67165.1 | SAMN05660691_00796 | SAMN05660691_00797 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.863 |
SEH67151.1 | SEH67178.1 | SAMN05660691_00796 | SAMN05660691_00798 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.964 |
SEH67151.1 | SEH67188.1 | SAMN05660691_00796 | SAMN05660691_00799 | ABC-2 type transport system permease protein. | Iron complex outermembrane recepter protein. | 0.886 |
SEH67165.1 | SEH67151.1 | SAMN05660691_00797 | SAMN05660691_00796 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.863 |
SEH67165.1 | SEH67178.1 | SAMN05660691_00797 | SAMN05660691_00798 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.997 |
SEH67165.1 | SEH67188.1 | SAMN05660691_00797 | SAMN05660691_00799 | ABC-2 type transport system permease protein. | Iron complex outermembrane recepter protein. | 0.877 |
SEH67165.1 | SEH93170.1 | SAMN05660691_00797 | SAMN05660691_02251 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.951 |
SEH67178.1 | SEH67151.1 | SAMN05660691_00798 | SAMN05660691_00796 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.964 |
SEH67178.1 | SEH67165.1 | SAMN05660691_00798 | SAMN05660691_00797 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.997 |
SEH67178.1 | SEH67188.1 | SAMN05660691_00798 | SAMN05660691_00799 | ABC-2 type transport system ATP-binding protein. | Iron complex outermembrane recepter protein. | 0.715 |
SEH67178.1 | SEH73832.1 | SAMN05660691_00798 | SAMN05660691_01149 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.830 |
SEH67178.1 | SEH93170.1 | SAMN05660691_00798 | SAMN05660691_02251 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system ATP-binding protein. | 0.909 |
SEH67178.1 | SEI11907.1 | SAMN05660691_00798 | SAMN05660691_03882 | ABC-2 type transport system ATP-binding protein. | Putative ABC transport system ATP-binding protein. | 0.872 |
SEH67178.1 | atpA | SAMN05660691_00798 | SAMN05660691_00871 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.776 |
SEH67178.1 | atpC | SAMN05660691_00798 | SAMN05660691_00868 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.753 |
SEH67178.1 | atpD | SAMN05660691_00798 | SAMN05660691_00869 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.783 |
SEH67178.1 | atpG | SAMN05660691_00798 | SAMN05660691_00870 | ABC-2 type transport system ATP-binding protein. | F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.713 |
SEH67188.1 | SEH67151.1 | SAMN05660691_00799 | SAMN05660691_00796 | Iron complex outermembrane recepter protein. | ABC-2 type transport system permease protein. | 0.886 |
SEH67188.1 | SEH67165.1 | SAMN05660691_00799 | SAMN05660691_00797 | Iron complex outermembrane recepter protein. | ABC-2 type transport system permease protein. | 0.877 |
SEH67188.1 | SEH67178.1 | SAMN05660691_00799 | SAMN05660691_00798 | Iron complex outermembrane recepter protein. | ABC-2 type transport system ATP-binding protein. | 0.715 |
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