STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH72014.1Asparagine synthase (glutamine-hydrolysing). (603 aa)    
Predicted Functional Partners:
SEI09483.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.924
SEH92863.1
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.897
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
 0.894
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.888
SEI10973.1
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.887
SEH83893.1
Aspartate kinase.
  
 
 0.878
SEH92453.1
Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family.
  
 
 0.878
SEH72026.1
Polysaccharide deacetylase.
 
     0.864
SEH72040.1
Acetyltransferase (GNAT) domain-containing protein.
 
     0.850
SEI04383.1
Methionine aminotransferase.
  
  
 0.829
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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