STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH72040.1Acetyltransferase (GNAT) domain-containing protein. (356 aa)    
Predicted Functional Partners:
SEH72051.1
Acetyltransferase (GNAT) domain-containing protein.
    
0.975
SEH72026.1
Polysaccharide deacetylase.
 
     0.946
SEH72014.1
Asparagine synthase (glutamine-hydrolysing).
 
     0.850
SEH72065.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.802
SEH72086.1
Exosortase A system-associated hydrolase 1.
 
     0.787
SEH72073.1
Exosortase A system-associated hydrolase 2.
 
   
 0.769
SEH71976.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.731
SEH71939.1
phenylacetate-CoA ligase.
 
     0.713
SEH71989.1
Succinoglycan biosynthesis protein ExoV.
 
   
 0.706
SEH72186.1
Acyl carrier protein.
 
     0.705
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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