STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH73754.1Beta-glucosidase. (480 aa)    
Predicted Functional Partners:
SEH73743.1
Glycosyl hydrolase family 3 C-terminal domain-containing protein.
     0.988
SEH65091.1
Chitinase family 18.
  
  
 0.819
SEH65078.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.810
SEI05039.1
Cyclic beta-1,2-glucan synthetase.
    
 0.806
SEH88426.1
CubicO group peptidase, beta-lactamase class C family.
 
 
 0.783
SEH67017.1
Glycosyl hydrolases family 16.
  
  0.759
SEH59949.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.734
SEH55538.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
  0.718
SEH58159.1
Glycosyl hydrolases family 16.
 
  
  0.698
SEH73767.1
Glycosyl hydrolases family 16.
    
  0.675
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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