STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH74564.1Multimeric flavodoxin WrbA. (187 aa)    
Predicted Functional Partners:
SEI10922.1
NAD(P)H dehydrogenase (quinone); Belongs to the WrbA family.
  
     0.759
SEH89935.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.728
SEH75037.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.719
SEI12210.1
LysM domain-containing protein.
   
  
 0.692
SEI09713.1
Putative serine protein kinase, PrkA.
   
    0.659
SEH74586.1
Glyoxalase-like domain-containing protein.
 
     0.640
SEH74576.1
NAD(P)H-dependent FMN reductase.
     
 0.619
SEH96910.1
Hyperosmotically inducible protein.
   
    0.602
SEI05055.1
BON domain-containing protein.
   
    0.602
SEH72604.1
Nicotinamidase-related amidase.
   
    0.596
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.