STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH75008.1Colanic acid/amylovoran biosynthesis protein. (386 aa)    
Predicted Functional Partners:
SEH74997.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
 
 0.947
wecA
UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55). Belongs to the glycosyltransferase 4 family. WecA subfamily.
     
 0.754
SEH74970.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.750
SEI08620.1
Tetratricopeptide repeat-containing protein.
  
     0.711
SEI04429.1
Conserved hypothetical protein.
  
     0.672
SEI07628.1
Putative zinc-or iron-chelating domain-containing protein.
  
     0.668
SEH56485.1
Protein of unknown function.
  
     0.667
SEI10115.1
Hypothetical protein.
  
     0.666
SEI08577.1
ABC-2 type transport system permease protein.
  
     0.645
SEH74941.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.640
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.