Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH55756.1 | SEH65949.1 | SAMN05660691_00114 | SAMN05660691_00701 | D-alanine transaminase. | Acetolactate synthase, large subunit. | 0.728 |
SEH55756.1 | SEH83582.1 | SAMN05660691_00114 | SAMN05660691_01673 | D-alanine transaminase. | L-arabinonate dehydratase; Belongs to the IlvD/Edd family. | 0.908 |
SEH55756.1 | SEI05128.1 | SAMN05660691_00114 | SAMN05660691_03127 | D-alanine transaminase. | Acetolactate synthase, small subunit. | 0.745 |
SEH55756.1 | SEI05135.1 | SAMN05660691_00114 | SAMN05660691_03128 | D-alanine transaminase. | Acetolactate synthase, large subunit. | 0.728 |
SEH55756.1 | SEI09483.1 | SAMN05660691_00114 | SAMN05660691_03576 | D-alanine transaminase. | Glutamate synthase (NADPH/NADH) large chain. | 0.518 |
SEH55756.1 | ilvC | SAMN05660691_00114 | SAMN05660691_03502 | D-alanine transaminase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.545 |
SEH55756.1 | leuA | SAMN05660691_00114 | SAMN05660691_00596 | D-alanine transaminase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.891 |
SEH55756.1 | leuC | SAMN05660691_00114 | SAMN05660691_00594 | D-alanine transaminase. | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.550 |
SEH65949.1 | SEH55756.1 | SAMN05660691_00701 | SAMN05660691_00114 | Acetolactate synthase, large subunit. | D-alanine transaminase. | 0.728 |
SEH65949.1 | SEH83582.1 | SAMN05660691_00701 | SAMN05660691_01673 | Acetolactate synthase, large subunit. | L-arabinonate dehydratase; Belongs to the IlvD/Edd family. | 0.919 |
SEH65949.1 | SEH95502.1 | SAMN05660691_00701 | SAMN05660691_02410 | Acetolactate synthase, large subunit. | 4-amino-4-deoxychorismate lyase. | 0.728 |
SEH65949.1 | SEI05128.1 | SAMN05660691_00701 | SAMN05660691_03127 | Acetolactate synthase, large subunit. | Acetolactate synthase, small subunit. | 0.999 |
SEH65949.1 | SEI09483.1 | SAMN05660691_00701 | SAMN05660691_03576 | Acetolactate synthase, large subunit. | Glutamate synthase (NADPH/NADH) large chain. | 0.649 |
SEH65949.1 | SEI11361.1 | SAMN05660691_00701 | SAMN05660691_03810 | Acetolactate synthase, large subunit. | Branched-chain amino acid aminotransferase. | 0.768 |
SEH65949.1 | ilvC | SAMN05660691_00701 | SAMN05660691_03502 | Acetolactate synthase, large subunit. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.975 |
SEH65949.1 | leuA | SAMN05660691_00701 | SAMN05660691_00596 | Acetolactate synthase, large subunit. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. | 0.955 |
SEH65949.1 | leuC | SAMN05660691_00701 | SAMN05660691_00594 | Acetolactate synthase, large subunit. | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.858 |
SEH83582.1 | SEH55756.1 | SAMN05660691_01673 | SAMN05660691_00114 | L-arabinonate dehydratase; Belongs to the IlvD/Edd family. | D-alanine transaminase. | 0.908 |
SEH83582.1 | SEH65949.1 | SAMN05660691_01673 | SAMN05660691_00701 | L-arabinonate dehydratase; Belongs to the IlvD/Edd family. | Acetolactate synthase, large subunit. | 0.919 |
SEH83582.1 | SEH95502.1 | SAMN05660691_01673 | SAMN05660691_02410 | L-arabinonate dehydratase; Belongs to the IlvD/Edd family. | 4-amino-4-deoxychorismate lyase. | 0.907 |
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