STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH85117.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
SEI11834.1
Imidazolonepropionase.
  
     0.665
SEH79447.1
Histidine phosphatase superfamily (branch 1).
  
     0.626
SEH85609.1
PepSY-associated TM region.
  
    0.545
SEI05220.1
Iron complex outermembrane recepter protein.
  
     0.544
SEH66720.1
Imidazolonepropionase.
  
     0.522
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
       0.516
SEH85142.1
Outer membrane receptor proteins, mostly Fe transport.
 
     0.501
SEH65376.1
Imidazolonepropionase.
  
     0.489
SEH89970.1
Uncharacterized conserved protein, DUF885 familyt.
  
     0.484
SEI11920.1
Protein of unknown function.
  
     0.479
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.