Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH80345.1 | SEH88671.1 | SAMN05660691_01553 | SAMN05660691_01960 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphoglucomutase. | 0.941 |
SEH80345.1 | SEH88684.1 | SAMN05660691_01553 | SAMN05660691_01961 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.417 |
SEH80345.1 | SEH89163.1 | SAMN05660691_01553 | SAMN05660691_01995 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphomannomutase. | 0.909 |
SEH80345.1 | SEI10758.1 | SAMN05660691_01553 | SAMN05660691_03722 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Phosphotransferase system IIA component. | 0.963 |
SEH80345.1 | pgi | SAMN05660691_01553 | SAMN05660691_02190 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.990 |
SEH80345.1 | rpiA | SAMN05660691_01553 | SAMN05660691_01450 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.945 |
SEH80345.1 | tal | SAMN05660691_01553 | SAMN05660691_02189 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.996 |
SEH80345.1 | zwf | SAMN05660691_01553 | SAMN05660691_02045 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.943 |
SEH80859.1 | SEH88671.1 | SAMN05660691_01593 | SAMN05660691_01960 | Glycogen recognition site of AMP-activated protein kinase. | Phosphoglucomutase. | 0.943 |
SEH80859.1 | SEH88684.1 | SAMN05660691_01593 | SAMN05660691_01961 | Glycogen recognition site of AMP-activated protein kinase. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.957 |
SEH80859.1 | SEH89163.1 | SAMN05660691_01593 | SAMN05660691_01995 | Glycogen recognition site of AMP-activated protein kinase. | Phosphomannomutase. | 0.783 |
SEH80859.1 | SEI10758.1 | SAMN05660691_01593 | SAMN05660691_03722 | Glycogen recognition site of AMP-activated protein kinase. | Phosphotransferase system IIA component. | 0.442 |
SEH80859.1 | pgi | SAMN05660691_01593 | SAMN05660691_02190 | Glycogen recognition site of AMP-activated protein kinase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.555 |
SEH88671.1 | SEH80345.1 | SAMN05660691_01960 | SAMN05660691_01553 | Phosphoglucomutase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.941 |
SEH88671.1 | SEH80859.1 | SAMN05660691_01960 | SAMN05660691_01593 | Phosphoglucomutase. | Glycogen recognition site of AMP-activated protein kinase. | 0.943 |
SEH88671.1 | SEH88684.1 | SAMN05660691_01960 | SAMN05660691_01961 | Phosphoglucomutase. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.995 |
SEH88671.1 | SEH89163.1 | SAMN05660691_01960 | SAMN05660691_01995 | Phosphoglucomutase. | Phosphomannomutase. | 0.948 |
SEH88671.1 | SEI10758.1 | SAMN05660691_01960 | SAMN05660691_03722 | Phosphoglucomutase. | Phosphotransferase system IIA component. | 0.960 |
SEH88671.1 | glgB | SAMN05660691_01960 | SAMN05660691_01917 | Phosphoglucomutase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.990 |
SEH88671.1 | pgi | SAMN05660691_01960 | SAMN05660691_02190 | Phosphoglucomutase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.993 |
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