Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH92150.1 | SEH92160.1 | SAMN05660691_02168 | SAMN05660691_02169 | Hypothetical protein. | DNA-binding transcriptional regulator, PadR family. | 0.952 |
SEH92150.1 | SEI00231.1 | SAMN05660691_02168 | SAMN05660691_02742 | Hypothetical protein. | Amino acid adenylation domain-containing protein. | 0.888 |
SEH92150.1 | SEI03721.1 | SAMN05660691_02168 | SAMN05660691_03018 | Hypothetical protein. | Oxaloacetate decarboxylase, alpha subunit. | 0.812 |
SEH92150.1 | SEI05577.1 | SAMN05660691_02168 | SAMN05660691_03149 | Hypothetical protein. | Amino acid adenylation domain-containing protein. | 0.950 |
SEH92150.1 | SEI05593.1 | SAMN05660691_02168 | SAMN05660691_03151 | Hypothetical protein. | Taurine dioxygenase, alpha-ketoglutarate-dependent. | 0.849 |
SEH92150.1 | SEI05603.1 | SAMN05660691_02168 | SAMN05660691_03152 | Hypothetical protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.985 |
SEH92150.1 | SEI05611.1 | SAMN05660691_02168 | SAMN05660691_03153 | Hypothetical protein. | Acyl transferase domain-containing protein. | 0.995 |
SEH92150.1 | SEI14412.1 | SAMN05660691_02168 | SAMN05660691_04192 | Hypothetical protein. | HxxPF-repeated domain-containing protein. | 0.861 |
SEH92150.1 | fadB | SAMN05660691_02168 | SAMN05660691_03910 | Hypothetical protein. | Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.847 |
SEH92150.1 | fadJ | SAMN05660691_02168 | SAMN05660691_00960 | Hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.847 |
SEH92160.1 | SEH92150.1 | SAMN05660691_02169 | SAMN05660691_02168 | DNA-binding transcriptional regulator, PadR family. | Hypothetical protein. | 0.952 |
SEI00231.1 | SEH92150.1 | SAMN05660691_02742 | SAMN05660691_02168 | Amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.888 |
SEI00231.1 | SEI03721.1 | SAMN05660691_02742 | SAMN05660691_03018 | Amino acid adenylation domain-containing protein. | Oxaloacetate decarboxylase, alpha subunit. | 0.818 |
SEI00231.1 | SEI05577.1 | SAMN05660691_02742 | SAMN05660691_03149 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SEI00231.1 | SEI05593.1 | SAMN05660691_02742 | SAMN05660691_03151 | Amino acid adenylation domain-containing protein. | Taurine dioxygenase, alpha-ketoglutarate-dependent. | 0.999 |
SEI00231.1 | SEI05603.1 | SAMN05660691_02742 | SAMN05660691_03152 | Amino acid adenylation domain-containing protein. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
SEI00231.1 | SEI05611.1 | SAMN05660691_02742 | SAMN05660691_03153 | Amino acid adenylation domain-containing protein. | Acyl transferase domain-containing protein. | 0.999 |
SEI00231.1 | SEI14412.1 | SAMN05660691_02742 | SAMN05660691_04192 | Amino acid adenylation domain-containing protein. | HxxPF-repeated domain-containing protein. | 0.999 |
SEI00231.1 | fadB | SAMN05660691_02742 | SAMN05660691_03910 | Amino acid adenylation domain-containing protein. | Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.919 |
SEI00231.1 | fadJ | SAMN05660691_02742 | SAMN05660691_00960 | Amino acid adenylation domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.919 |
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