Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH66079.1 | SEH95290.1 | SAMN05660691_00710 | SAMN05660691_02392 | Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase. | Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.761 |
SEH66079.1 | SEH95315.1 | SAMN05660691_00710 | SAMN05660691_02394 | Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase. | Na+/proline symporter. | 0.677 |
SEH66079.1 | fadB | SAMN05660691_00710 | SAMN05660691_03910 | Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase. | Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.970 |
SEH66079.1 | fadJ | SAMN05660691_00710 | SAMN05660691_00960 | Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.970 |
SEH92100.1 | SEH95290.1 | SAMN05660691_02163 | SAMN05660691_02392 | propionyl-CoA synthetase. | Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.808 |
SEH92100.1 | SEH95315.1 | SAMN05660691_02163 | SAMN05660691_02394 | propionyl-CoA synthetase. | Na+/proline symporter. | 0.714 |
SEH92100.1 | acsA | SAMN05660691_02163 | SAMN05660691_02396 | propionyl-CoA synthetase. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.857 |
SEH92100.1 | fadB | SAMN05660691_02163 | SAMN05660691_03910 | propionyl-CoA synthetase. | Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.970 |
SEH92100.1 | fadJ | SAMN05660691_02163 | SAMN05660691_00960 | propionyl-CoA synthetase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.972 |
SEH95256.1 | SEH95269.1 | SAMN05660691_02389 | SAMN05660691_02390 | DNA polymerase-3 subunit epsilon. | CBS domain-containing protein. | 0.976 |
SEH95256.1 | SEH95281.1 | SAMN05660691_02389 | SAMN05660691_02391 | DNA polymerase-3 subunit epsilon. | Hypothetical protein. | 0.722 |
SEH95256.1 | SEH95290.1 | SAMN05660691_02389 | SAMN05660691_02392 | DNA polymerase-3 subunit epsilon. | Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.785 |
SEH95256.1 | SEH95302.1 | SAMN05660691_02389 | SAMN05660691_02393 | DNA polymerase-3 subunit epsilon. | Putative solute:sodium symporter small subunit. | 0.734 |
SEH95256.1 | SEH95315.1 | SAMN05660691_02389 | SAMN05660691_02394 | DNA polymerase-3 subunit epsilon. | Na+/proline symporter. | 0.491 |
SEH95269.1 | SEH95256.1 | SAMN05660691_02390 | SAMN05660691_02389 | CBS domain-containing protein. | DNA polymerase-3 subunit epsilon. | 0.976 |
SEH95269.1 | SEH95281.1 | SAMN05660691_02390 | SAMN05660691_02391 | CBS domain-containing protein. | Hypothetical protein. | 0.879 |
SEH95269.1 | SEH95290.1 | SAMN05660691_02390 | SAMN05660691_02392 | CBS domain-containing protein. | Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.983 |
SEH95269.1 | SEH95302.1 | SAMN05660691_02390 | SAMN05660691_02393 | CBS domain-containing protein. | Putative solute:sodium symporter small subunit. | 0.888 |
SEH95269.1 | SEH95315.1 | SAMN05660691_02390 | SAMN05660691_02394 | CBS domain-containing protein. | Na+/proline symporter. | 0.811 |
SEH95281.1 | SEH95256.1 | SAMN05660691_02391 | SAMN05660691_02389 | Hypothetical protein. | DNA polymerase-3 subunit epsilon. | 0.722 |
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