Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH55026.1 | SEH74054.1 | SAMN05660691_00052 | SAMN05660691_01167 | Chemotaxis protein MotA. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.923 |
SEH55026.1 | SEH99400.1 | SAMN05660691_00052 | SAMN05660691_02658 | Chemotaxis protein MotA. | Purine-binding chemotaxis protein CheW. | 0.742 |
SEH55026.1 | SEH99407.1 | SAMN05660691_00052 | SAMN05660691_02659 | Chemotaxis protein MotA. | Purine-binding chemotaxis protein CheW. | 0.706 |
SEH55026.1 | SEH99425.1 | SAMN05660691_00052 | SAMN05660691_02661 | Chemotaxis protein MotA. | Chemotaxis protein MotB. | 0.985 |
SEH55026.1 | SEH99449.1 | SAMN05660691_00052 | SAMN05660691_02664 | Chemotaxis protein MotA. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.837 |
SEH55026.1 | SEH99457.1 | SAMN05660691_00052 | SAMN05660691_02665 | Chemotaxis protein MotA. | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.769 |
SEH55026.1 | cheB-2 | SAMN05660691_00052 | SAMN05660691_02663 | Chemotaxis protein MotA. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.609 |
SEH55026.1 | flhA-2 | SAMN05660691_00052 | SAMN05660691_02670 | Chemotaxis protein MotA. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.896 |
SEH74054.1 | SEH55026.1 | SAMN05660691_01167 | SAMN05660691_00052 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein MotA. | 0.923 |
SEH74054.1 | SEH78264.1 | SAMN05660691_01167 | SAMN05660691_01374 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein MotA. | 0.923 |
SEH74054.1 | SEH99400.1 | SAMN05660691_01167 | SAMN05660691_02658 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Purine-binding chemotaxis protein CheW. | 0.987 |
SEH74054.1 | SEH99407.1 | SAMN05660691_01167 | SAMN05660691_02659 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Purine-binding chemotaxis protein CheW. | 0.983 |
SEH74054.1 | SEH99425.1 | SAMN05660691_01167 | SAMN05660691_02661 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein MotB. | 0.933 |
SEH74054.1 | SEH99432.1 | SAMN05660691_01167 | SAMN05660691_02662 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein MotA. | 0.923 |
SEH74054.1 | SEH99449.1 | SAMN05660691_01167 | SAMN05660691_02664 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.999 |
SEH74054.1 | SEH99457.1 | SAMN05660691_01167 | SAMN05660691_02665 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P). | 0.983 |
SEH74054.1 | cheB-2 | SAMN05660691_01167 | SAMN05660691_02663 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.954 |
SEH74054.1 | flhA-2 | SAMN05660691_01167 | SAMN05660691_02670 | Two-component system, chemotaxis family, CheB/CheR fusion protein. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.952 |
SEH78264.1 | SEH74054.1 | SAMN05660691_01374 | SAMN05660691_01167 | Chemotaxis protein MotA. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.923 |
SEH78264.1 | SEH99400.1 | SAMN05660691_01374 | SAMN05660691_02658 | Chemotaxis protein MotA. | Purine-binding chemotaxis protein CheW. | 0.746 |
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