Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH54766.1 | SEH99747.1 | SAMN05660691_00034 | SAMN05660691_02699 | Flagellar hook-associated protein 3 FlgL. | Flagellar protein FliS. | 0.990 |
SEH54766.1 | SEH99760.1 | SAMN05660691_00034 | SAMN05660691_02700 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.954 |
SEH54766.1 | SEH99767.1 | SAMN05660691_00034 | SAMN05660691_02701 | Flagellar hook-associated protein 3 FlgL. | Flagellar protein FlaG. | 0.754 |
SEH54766.1 | SEH99776.1 | SAMN05660691_00034 | SAMN05660691_02702 | Flagellar hook-associated protein 3 FlgL. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.931 |
SEH54766.1 | SEH99800.1 | SAMN05660691_00034 | SAMN05660691_02704 | Flagellar hook-associated protein 3 FlgL. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.930 |
SEH54766.1 | SEH99829.1 | SAMN05660691_00034 | SAMN05660691_02707 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | 0.946 |
SEH54766.1 | SEH99989.1 | SAMN05660691_00034 | SAMN05660691_02720 | Flagellar hook-associated protein 3 FlgL. | Anti-sigma-28 factor, FlgM family. | 0.768 |
SEH54766.1 | flhA-2 | SAMN05660691_00034 | SAMN05660691_02670 | Flagellar hook-associated protein 3 FlgL. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.855 |
SEH54766.1 | fliE-2 | SAMN05660691_00034 | SAMN05660691_02685 | Flagellar hook-associated protein 3 FlgL. | Flagellar hook-basal body complex protein FliE. | 0.921 |
SEH99747.1 | SEH54766.1 | SAMN05660691_02699 | SAMN05660691_00034 | Flagellar protein FliS. | Flagellar hook-associated protein 3 FlgL. | 0.990 |
SEH99747.1 | SEH99760.1 | SAMN05660691_02699 | SAMN05660691_02700 | Flagellar protein FliS. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.996 |
SEH99747.1 | SEH99767.1 | SAMN05660691_02699 | SAMN05660691_02701 | Flagellar protein FliS. | Flagellar protein FlaG. | 0.985 |
SEH99747.1 | SEH99776.1 | SAMN05660691_02699 | SAMN05660691_02702 | Flagellar protein FliS. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.988 |
SEH99747.1 | SEH99800.1 | SAMN05660691_02699 | SAMN05660691_02704 | Flagellar protein FliS. | Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.980 |
SEH99747.1 | SEH99817.1 | SAMN05660691_02699 | SAMN05660691_02706 | Flagellar protein FliS. | Flagellar hook-associated protein 3 FlgL. | 0.995 |
SEH99747.1 | SEH99829.1 | SAMN05660691_02699 | SAMN05660691_02707 | Flagellar protein FliS. | Flagellar hook-associated protein 1 FlgK; Belongs to the flagella basal body rod proteins family. | 0.991 |
SEH99747.1 | SEH99989.1 | SAMN05660691_02699 | SAMN05660691_02720 | Flagellar protein FliS. | Anti-sigma-28 factor, FlgM family. | 0.980 |
SEH99747.1 | flhA-2 | SAMN05660691_02699 | SAMN05660691_02670 | Flagellar protein FliS. | Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.982 |
SEH99747.1 | fliE-2 | SAMN05660691_02699 | SAMN05660691_02685 | Flagellar protein FliS. | Flagellar hook-basal body complex protein FliE. | 0.980 |
SEH99760.1 | SEH54766.1 | SAMN05660691_02700 | SAMN05660691_00034 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 3 FlgL. | 0.954 |
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