Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI00028.1 | SEI00044.1 | SAMN05660691_02723 | SAMN05660691_02725 | Flagellar assembly protein T, C-terminal domain. | Integrase; Belongs to the 'phage' integrase family. | 0.401 |
SEI00044.1 | SEI00028.1 | SAMN05660691_02725 | SAMN05660691_02723 | Integrase; Belongs to the 'phage' integrase family. | Flagellar assembly protein T, C-terminal domain. | 0.401 |
SEI00044.1 | SEI05603.1 | SAMN05660691_02725 | SAMN05660691_03152 | Integrase; Belongs to the 'phage' integrase family. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.431 |
SEI00044.1 | guaA | SAMN05660691_02725 | SAMN05660691_00401 | Integrase; Belongs to the 'phage' integrase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.400 |
SEI05603.1 | SEI00044.1 | SAMN05660691_03152 | SAMN05660691_02725 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Integrase; Belongs to the 'phage' integrase family. | 0.431 |
SEI05603.1 | guaA | SAMN05660691_03152 | SAMN05660691_00401 | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.425 |
guaA | SEI00044.1 | SAMN05660691_00401 | SAMN05660691_02725 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Integrase; Belongs to the 'phage' integrase family. | 0.400 |
guaA | SEI05603.1 | SAMN05660691_00401 | SAMN05660691_03152 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.425 |