STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI03007.1Antitoxin ParD1/3/4. (81 aa)    
Predicted Functional Partners:
SEI03000.1
Toxin ParE1/3/4; Belongs to the RelE toxin family.
 
 
 0.992
SEH75141.1
Toxin ParE1/3/4; Belongs to the RelE toxin family.
 
 
 0.968
SEH54455.1
Toxin ParE1/3/4; Belongs to the RelE toxin family.
 
 
 0.964
SEH75102.1
Toxin ParE1/3/4.
 
 
 0.947
SEH63337.1
Plasmid stabilization system protein ParE.
  
 
 0.873
SEH94959.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
   
    0.867
SEH73925.1
Plasmid stabilization system protein ParE.
 
   0.794
SEH73889.1
ParE toxin of type II toxin-antitoxin system, parDE.
  
 
 0.751
SEH75154.1
Antitoxin ParD1/3/4.
  
   
 0.586
SEI03019.1
neurotransmitter:Na+ symporter, NSS family.
       0.518
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.