Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH66564.1 | SEI03259.1 | SAMN05660691_00748 | SAMN05660691_02950 | Hypothetical protein. | Uncharacterized membrane protein YccF, DUF307 family. | 0.663 |
SEI03250.1 | SEI03259.1 | SAMN05660691_02949 | SAMN05660691_02950 | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | Uncharacterized membrane protein YccF, DUF307 family. | 0.518 |
SEI03250.1 | SEI03265.1 | SAMN05660691_02949 | SAMN05660691_02951 | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | methylated-DNA-protein-cysteine methyltransferase related protein. | 0.436 |
SEI03259.1 | SEH66564.1 | SAMN05660691_02950 | SAMN05660691_00748 | Uncharacterized membrane protein YccF, DUF307 family. | Hypothetical protein. | 0.663 |
SEI03259.1 | SEI03250.1 | SAMN05660691_02950 | SAMN05660691_02949 | Uncharacterized membrane protein YccF, DUF307 family. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.518 |
SEI03259.1 | SEI03265.1 | SAMN05660691_02950 | SAMN05660691_02951 | Uncharacterized membrane protein YccF, DUF307 family. | methylated-DNA-protein-cysteine methyltransferase related protein. | 0.646 |
SEI03265.1 | SEI03250.1 | SAMN05660691_02951 | SAMN05660691_02949 | methylated-DNA-protein-cysteine methyltransferase related protein. | Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. | 0.436 |
SEI03265.1 | SEI03259.1 | SAMN05660691_02951 | SAMN05660691_02950 | methylated-DNA-protein-cysteine methyltransferase related protein. | Uncharacterized membrane protein YccF, DUF307 family. | 0.646 |