STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI03659.1Methyl-accepting chemotaxis protein. (405 aa)    
Predicted Functional Partners:
SEH65842.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.973
SEH99449.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.973
SEH65812.1
Purine-binding chemotaxis protein CheW.
 
 0.967
SEH99400.1
Purine-binding chemotaxis protein CheW.
 
 0.967
SEH99964.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.967
SEH77917.1
Two-component system, chemotaxis family, response regulator CheV.
 
 0.965
SEH92260.1
PAS domain S-box-containing protein.
  
 0.954
SEH92563.1
Signal transduction histidine kinase.
  
 0.948
cheB-2
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.904
SEH99951.1
Chemotaxis protein methyltransferase CheR.
 
 0.904
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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