Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI09812.1 | SEI09820.1 | SAMN05660691_03625 | SAMN05660691_03626 | Hypothetical protein. | Hypothetical protein. | 0.655 |
SEI09812.1 | SEI09827.1 | SAMN05660691_03625 | SAMN05660691_03627 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0276 family. | 0.655 |
SEI09812.1 | SEI09834.1 | SAMN05660691_03625 | SAMN05660691_03628 | Hypothetical protein. | Hypothetical protein. | 0.478 |
SEI09812.1 | apt | SAMN05660691_03625 | SAMN05660691_03624 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.561 |
SEI09812.1 | dnaX | SAMN05660691_03625 | SAMN05660691_03623 | Hypothetical protein. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.461 |
SEI09820.1 | SEI09812.1 | SAMN05660691_03626 | SAMN05660691_03625 | Hypothetical protein. | Hypothetical protein. | 0.655 |
SEI09820.1 | SEI09827.1 | SAMN05660691_03626 | SAMN05660691_03627 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0276 family. | 0.996 |
SEI09820.1 | SEI09834.1 | SAMN05660691_03626 | SAMN05660691_03628 | Hypothetical protein. | Hypothetical protein. | 0.960 |
SEI09820.1 | apt | SAMN05660691_03626 | SAMN05660691_03624 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.541 |
SEI09820.1 | dnaX | SAMN05660691_03626 | SAMN05660691_03623 | Hypothetical protein. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.466 |
SEI09827.1 | SEI09812.1 | SAMN05660691_03627 | SAMN05660691_03625 | Hypothetical protein; Belongs to the UPF0276 family. | Hypothetical protein. | 0.655 |
SEI09827.1 | SEI09820.1 | SAMN05660691_03627 | SAMN05660691_03626 | Hypothetical protein; Belongs to the UPF0276 family. | Hypothetical protein. | 0.996 |
SEI09827.1 | SEI09834.1 | SAMN05660691_03627 | SAMN05660691_03628 | Hypothetical protein; Belongs to the UPF0276 family. | Hypothetical protein. | 0.965 |
SEI09827.1 | apt | SAMN05660691_03627 | SAMN05660691_03624 | Hypothetical protein; Belongs to the UPF0276 family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.534 |
SEI09827.1 | dnaX | SAMN05660691_03627 | SAMN05660691_03623 | Hypothetical protein; Belongs to the UPF0276 family. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.459 |
SEI09834.1 | SEI09812.1 | SAMN05660691_03628 | SAMN05660691_03625 | Hypothetical protein. | Hypothetical protein. | 0.478 |
SEI09834.1 | SEI09820.1 | SAMN05660691_03628 | SAMN05660691_03626 | Hypothetical protein. | Hypothetical protein. | 0.960 |
SEI09834.1 | SEI09827.1 | SAMN05660691_03628 | SAMN05660691_03627 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0276 family. | 0.965 |
SEI09834.1 | apt | SAMN05660691_03628 | SAMN05660691_03624 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.428 |
apt | SEI09812.1 | SAMN05660691_03624 | SAMN05660691_03625 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.561 |
page 1 of 2