Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH66417.1 | SEI09483.1 | SAMN05660691_00736 | SAMN05660691_03576 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Glutamate synthase (NADPH/NADH) large chain. | 0.529 |
SEH66417.1 | SEI10069.1 | SAMN05660691_00736 | SAMN05660691_03647 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | Ferric uptake regulator family protein; Belongs to the Fur family. | 0.752 |
SEH66417.1 | rpoB | SAMN05660691_00736 | SAMN05660691_04092 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.455 |
SEI09483.1 | SEH66417.1 | SAMN05660691_03576 | SAMN05660691_00736 | Glutamate synthase (NADPH/NADH) large chain. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. | 0.529 |
SEI09483.1 | SEI10069.1 | SAMN05660691_03576 | SAMN05660691_03647 | Glutamate synthase (NADPH/NADH) large chain. | Ferric uptake regulator family protein; Belongs to the Fur family. | 0.956 |
SEI09483.1 | folE2 | SAMN05660691_03576 | SAMN05660691_03648 | Glutamate synthase (NADPH/NADH) large chain. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.518 |
SEI09483.1 | rpoA | SAMN05660691_03576 | SAMN05660691_04028 | Glutamate synthase (NADPH/NADH) large chain. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.457 |
SEI09483.1 | rpoB | SAMN05660691_03576 | SAMN05660691_04092 | Glutamate synthase (NADPH/NADH) large chain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.472 |
SEI09483.1 | rpoC | SAMN05660691_03576 | SAMN05660691_04093 | Glutamate synthase (NADPH/NADH) large chain. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.535 |
SEI10050.1 | SEI10058.1 | SAMN05660691_03644 | SAMN05660691_03645 | MerC mercury resistance protein. | GTPase, G3E family. | 0.804 |
SEI10050.1 | SEI10064.1 | SAMN05660691_03644 | SAMN05660691_03646 | MerC mercury resistance protein. | Protein of unknown function. | 0.803 |
SEI10050.1 | SEI10069.1 | SAMN05660691_03644 | SAMN05660691_03647 | MerC mercury resistance protein. | Ferric uptake regulator family protein; Belongs to the Fur family. | 0.637 |
SEI10050.1 | folE2 | SAMN05660691_03644 | SAMN05660691_03648 | MerC mercury resistance protein. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.594 |
SEI10058.1 | SEI10050.1 | SAMN05660691_03645 | SAMN05660691_03644 | GTPase, G3E family. | MerC mercury resistance protein. | 0.804 |
SEI10058.1 | SEI10064.1 | SAMN05660691_03645 | SAMN05660691_03646 | GTPase, G3E family. | Protein of unknown function. | 0.947 |
SEI10058.1 | SEI10069.1 | SAMN05660691_03645 | SAMN05660691_03647 | GTPase, G3E family. | Ferric uptake regulator family protein; Belongs to the Fur family. | 0.696 |
SEI10058.1 | folE2 | SAMN05660691_03645 | SAMN05660691_03648 | GTPase, G3E family. | GTP cyclohydrolase I; Converts GTP to 7,8-dihydroneopterin triphosphate. | 0.950 |
SEI10064.1 | SEI10050.1 | SAMN05660691_03646 | SAMN05660691_03644 | Protein of unknown function. | MerC mercury resistance protein. | 0.803 |
SEI10064.1 | SEI10058.1 | SAMN05660691_03646 | SAMN05660691_03645 | Protein of unknown function. | GTPase, G3E family. | 0.947 |
SEI10064.1 | SEI10069.1 | SAMN05660691_03646 | SAMN05660691_03647 | Protein of unknown function. | Ferric uptake regulator family protein; Belongs to the Fur family. | 0.637 |
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