Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH54641.1 | SEI10892.1 | SAMN05660691_00025 | SAMN05660691_03750 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Peroxiredoxin Q/BCP. | 0.729 |
SEH99926.1 | SEI10892.1 | SAMN05660691_02715 | SAMN05660691_03750 | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | Peroxiredoxin Q/BCP. | 0.729 |
SEI10873.1 | SEI10886.1 | SAMN05660691_03747 | SAMN05660691_03749 | Outer membrane protein assembly factor BamC. | Glycine cleavage system transcriptional repressor. | 0.678 |
SEI10873.1 | SEI10892.1 | SAMN05660691_03747 | SAMN05660691_03750 | Outer membrane protein assembly factor BamC. | Peroxiredoxin Q/BCP. | 0.566 |
SEI10873.1 | SEI10903.1 | SAMN05660691_03747 | SAMN05660691_03752 | Outer membrane protein assembly factor BamC. | Iron complex outermembrane recepter protein. | 0.407 |
SEI10873.1 | dapA | SAMN05660691_03747 | SAMN05660691_03748 | Outer membrane protein assembly factor BamC. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.759 |
SEI10886.1 | SEI10873.1 | SAMN05660691_03749 | SAMN05660691_03747 | Glycine cleavage system transcriptional repressor. | Outer membrane protein assembly factor BamC. | 0.678 |
SEI10886.1 | SEI10892.1 | SAMN05660691_03749 | SAMN05660691_03750 | Glycine cleavage system transcriptional repressor. | Peroxiredoxin Q/BCP. | 0.847 |
SEI10886.1 | SEI10896.1 | SAMN05660691_03749 | SAMN05660691_03751 | Glycine cleavage system transcriptional repressor. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.472 |
SEI10886.1 | SEI10903.1 | SAMN05660691_03749 | SAMN05660691_03752 | Glycine cleavage system transcriptional repressor. | Iron complex outermembrane recepter protein. | 0.472 |
SEI10886.1 | dapA | SAMN05660691_03749 | SAMN05660691_03748 | Glycine cleavage system transcriptional repressor. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.776 |
SEI10892.1 | SEH54641.1 | SAMN05660691_03750 | SAMN05660691_00025 | Peroxiredoxin Q/BCP. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.729 |
SEI10892.1 | SEH99926.1 | SAMN05660691_03750 | SAMN05660691_02715 | Peroxiredoxin Q/BCP. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.729 |
SEI10892.1 | SEI10873.1 | SAMN05660691_03750 | SAMN05660691_03747 | Peroxiredoxin Q/BCP. | Outer membrane protein assembly factor BamC. | 0.566 |
SEI10892.1 | SEI10886.1 | SAMN05660691_03750 | SAMN05660691_03749 | Peroxiredoxin Q/BCP. | Glycine cleavage system transcriptional repressor. | 0.847 |
SEI10892.1 | SEI10896.1 | SAMN05660691_03750 | SAMN05660691_03751 | Peroxiredoxin Q/BCP. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.505 |
SEI10892.1 | SEI10903.1 | SAMN05660691_03750 | SAMN05660691_03752 | Peroxiredoxin Q/BCP. | Iron complex outermembrane recepter protein. | 0.490 |
SEI10892.1 | SEI11361.1 | SAMN05660691_03750 | SAMN05660691_03810 | Peroxiredoxin Q/BCP. | Branched-chain amino acid aminotransferase. | 0.614 |
SEI10892.1 | SEI13292.1 | SAMN05660691_03750 | SAMN05660691_04075 | Peroxiredoxin Q/BCP. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.740 |
SEI10892.1 | dapA | SAMN05660691_03750 | SAMN05660691_03748 | Peroxiredoxin Q/BCP. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.646 |
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