STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI12037.1Transposase, Mutator family. (86 aa)    
Predicted Functional Partners:
SEI11534.1
Transposase and inactivated derivatives; Required for the transposition of the insertion element.
 
     0.863
SEH70755.1
Transposase and inactivated derivatives; Required for the transposition of the insertion element.
 
     0.768
SEH86391.1
Transposase and inactivated derivatives.
 
     0.768
SEH81497.1
Transposase and inactivated derivatives.
 
     0.761
SEH68590.1
Transposase and inactivated derivatives; Required for the transposition of the insertion element.
 
     0.757
SEH87623.1
Transposase and inactivated derivatives.
 
     0.757
SEI13523.1
Transposase and inactivated derivatives.
 
     0.757
SEH98854.1
Transposase, Mutator family.
 
     0.748
SEI12044.1
Hypothetical protein.
       0.473
SEI12051.1
Hypothetical protein.
       0.473
Your Current Organism:
Rheinheimera pacifica
NCBI taxonomy Id: 173990
Other names: CCUG 46544, DSM 17616, IAM 15043, JCM 12090, NBRC 103167, NRIC 0539, R. pacifica, Rheinheimera pacifica Romanenko et al. 2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.