STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQB99028.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)    
Predicted Functional Partners:
miaA-2
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.765
KQB99026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.765
KQB99027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.765
KQC01599.1
Semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.549
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
   0.533
KQB99029.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
KQB99024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.439
KQB99023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
Your Current Organism:
Pedobacter sp. Hv1
NCBI taxonomy Id: 1740090
Other names: P. sp. Hv1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.