STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661595_00147Unannotated protein. (663 aa)    
Predicted Functional Partners:
GCA_001661595_01040
Unannotated protein.
  
     0.693
GCA_001661595_00762
Unannotated protein.
  
     0.640
GCA_001661595_00145
Unannotated protein.
       0.510
GCA_001661595_00146
Unannotated protein.
       0.510
GCA_001661595_02076
Unannotated protein.
  
     0.509
GCA_001661595_00982
Unannotated protein.
  
     0.501
GCA_001661595_01027
Unannotated protein.
  
     0.498
GCA_001661595_00475
Unannotated protein.
  
     0.482
GCA_001661595_01840
Unannotated protein.
  
     0.479
GCA_001661595_01955
Unannotated protein.
  
     0.472
Your Current Organism:
Crocinitomix algicola
NCBI taxonomy Id: 1740263
Other names: C. algicola, Crocinitomix algicola Shi et al. 2017, Crocinitomix sp. 0182, KCTC 42868, MCCC 1H00128, strain 0182
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.