STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0Y62_12520Unannotated protein. (339 aa)    
Predicted Functional Partners:
E0Y62_14220
Unannotated protein.
  
 
 0.865
E0Y62_04145
Unannotated protein.
 
 0.849
ispD
Unannotated protein; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).
  
 
 0.812
E0Y62_18220
Unannotated protein.
   
 
 0.776
E0Y62_04150
Unannotated protein.
 
 
 0.771
E0Y62_25400
Unannotated protein.
    
 0.770
E0Y62_01380
Unannotated protein.
    
 0.767
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
    
  0.759
E0Y62_12515
Unannotated protein.
       0.727
pyk
Unannotated protein; Belongs to the pyruvate kinase family.
  
 
 0.722
Your Current Organism:
Bacillus praedii
NCBI taxonomy Id: 1742358
Other names: B. praedii, Bacillus praedii Liu et al. 2017, Bacillus sp. FJAT-25547, CCTCC AB 2015208, DSM 101002, strain FJAT-25547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.