STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002049545_00060Unannotated protein. (254 aa)    
Predicted Functional Partners:
GCA_002049545_00059
Unannotated protein.
 0.999
GCA_002049545_01266
Unannotated protein.
 0.999
GCA_002049545_02159
Unannotated protein.
 
0.952
GCA_002049545_00680
Unannotated protein.
  
 
 0.855
GCA_002049545_00058
Unannotated protein.
       0.773
GCA_002049545_00057
Unannotated protein.
  
 
 0.760
GCA_002049545_01375
Unannotated protein.
  
 
 0.642
GCA_002049545_00061
Unannotated protein.
  
    0.626
GCA_002049545_02247
Unannotated protein.
    
 0.614
GCA_002049545_02216
Unannotated protein.
    
 0.604
Your Current Organism:
Deltaproteobacteria bacterium tcs42
NCBI taxonomy Id: 1742866
Other names: D. bacterium tcs-42, Deltaproteobacteria bacterium tcs-42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.