STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002049545_01763Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_002049545_01764
Unannotated protein.
 
     0.950
GCA_002049545_01765
Unannotated protein.
 
     0.875
GCA_002049545_01762
Unannotated protein.
 
    
0.786
GCA_002049545_00354
Unannotated protein.
    
 0.740
GCA_002049545_00355
Unannotated protein.
     
 0.739
GCA_002049545_00356
Unannotated protein.
     
 0.739
GCA_002049545_01973
Unannotated protein.
     
 0.738
GCA_002049545_01781
Unannotated protein.
    
  0.735
GCA_002049545_02229
Unannotated protein.
    
  0.682
GCA_002049545_01689
Unannotated protein.
  
 
  0.673
Your Current Organism:
Deltaproteobacteria bacterium tcs42
NCBI taxonomy Id: 1742866
Other names: D. bacterium tcs-42, Deltaproteobacteria bacterium tcs-42
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.