STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLY97554.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
OLY97373.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.810
OLY97372.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
OLY97374.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
OLY97371.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
OLY97361.1
Formate dehydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
OLY97555.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.478
OLY97356.1
Cytoplasmic chaperone TorD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.476
OLY97375.1
Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.475
OLY97355.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
OLY97358.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   
 0.454
Your Current Organism:
Polynucleobacter sphagniphilus
NCBI taxonomy Id: 1743169
Other names: CIP 111099, DSM 24018, P. sphagniphilus, Polynucleobacter sp. MWH-Weng1-1, Polynucleobacter sphagniphilus Hahn et al. 2017, strain MWH-Weng1-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.