STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW89160.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (404 aa)    
Predicted Functional Partners:
AWB92_07320
SAM-dependent methyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.982
ORW96736.1
Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.982
ORW89823.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.975
ORW88854.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.936
ORW97158.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.919
ORW92908.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.917
ORW85266.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.885
ORW85267.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.885
ORW85268.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.842
ORW91892.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.834
Your Current Organism:
Mycobacterium sp. IEC1808
NCBI taxonomy Id: 1743230
Other names: M. sp. IEC1808
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.