STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2J6PE16Uncharacterized protein. (91 aa)    
Predicted Functional Partners:
A0A2J6PUA6
PHD domain-containing protein.
    
 0.991
A0A2J6PRR9
TFIID_20kDa domain-containing protein.
   
 0.981
A0A2J6QNB5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
   
 0.980
A0A2J6PQT8
DUF3591 domain-containing protein.
    
 0.979
A0A2J6Q2B6
Transcription initiation factor TFIID subunit 5.
    
 0.979
A0A2J6Q436
Putative transcription initiation factor TFIID subunit 2.
    
 0.979
A0A2J6Q444
Uncharacterized protein.
    
 0.979
A0A2J6Q652
DUF1546-domain-containing protein.
   
 0.979
A0A2J6Q9R7
TBP-domain-containing protein.
    
 0.979
A0A2J6QLW2
Putative transcription initiation factor TFIID subunit 13.
   
 0.979
Your Current Organism:
Pezoloma ericae
NCBI taxonomy Id: 1745343
Other names: Hymenoscyphus ericae, P. ericae, Pezizella ericae, Pezizella ericae D.J.Read, Pezoloma ericae (D.J. Read) Baral, 2006, Rhizoscyphus ericae, UAMH 6735
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.